BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A09SP1|AL426141
(743 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1388 1465 0.0
>3x_Contig1388
Length = 8256
Score = 1465 bits (739), Expect = 0.0
Identities = 742/743 (99%)
Strand = Plus / Minus
Query: 1 gatctcatctcatctcatctcatctcaatcatttcagggaattccacacagctgcatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8122 gatctcatctcatctcatctcatctcaatcatttcagggaattccacacagctgcatctt 8063
Query: 61 ccggtcctcatcagcaagggaaatactggtatcctgatattactaagttgatgaatatca 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8062 ccggtcctcatcagcaaggaaaatactggtatcctgatattactaagttgatgaatatca 8003
Query: 121 agcaatttttcgttccagccgggaaacctttatccggtttggcagtaggactcagtatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8002 agcaatttttcgttccagccgggaaacctttatccggtttggcagtaggactcagtatct 7943
Query: 181 ttttaactgcattgttcttagtgaacaatctggtataccctatcaatgaacaccttctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7942 ttttaactgcattgttcttagtgaacaatctggtataccctatcaatgaacaccttctgc 7883
Query: 241 taaagcctgattcactattcaagtttgatttgaacagaatctcgttgtacccgttggctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7882 taaagcctgattcactattcaagtttgatttgaacagaatctcgttgtacccgttggctc 7823
Query: 301 atctctcatttttccatttgttcttcaatgtcatctcgactttctctatgattgtgatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7822 atctctcatttttccatttgttcttcaatgtcatctcgactttctctatgattgtgatgt 7763
Query: 361 tcgaggaatcccatggaactctttacactggtgtcatattgaatctattagccgtattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7762 tcgaggaatcccatggaactctttacactggtgtcatattgaatctattagccgtattta 7703
Query: 421 ctgcaatcccatactgtttaatcggttctttgctattccccaatgtcgagatcggtggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7702 ctgcaatcccatactgtttaatcggttctttgctattccccaatgtcgagatcggtggtg 7643
Query: 481 caagtggttggttcttctctttcttgggatactttgctgtgaaagaatcccgagttcgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7642 caagtggttggttcttctctttcttgggatactttgctgtgaaagaatcccgagttcgta 7583
Query: 541 actcagtgatgatcaccagtactttttcattcccaacattatacttcccagtagcattac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7582 actcagtgatgatcaccagtactttttcattcccaacattatacttcccagtagcattac 7523
Query: 601 tattcgttactgctctattggcgcctggttctagtctaccaggtcatgcaattgggttac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7522 tattcgttactgctctattggcgcctggttctagtctaccaggtcatgcaattgggttac 7463
Query: 661 tattaggatacttcatggggttgaaagagaattgggtagccaagattactccaccaagct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7462 tattaggatacttcatggggttgaaagagaattgggtagccaagattactccaccaagct 7403
Query: 721 ttgtattgaagaaaattgaaaca 743
|||||||||||||||||||||||
Sbjct: 7402 ttgtattgaagaaaattgaaaca 7380
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6826
Number of Sequences: 1807
Number of extensions: 6826
Number of successful extensions: 577
Number of sequences better than 1.0e-20: 1
length of query: 743
length of database: 10,358,551
effective HSP length: 16
effective length of query: 727
effective length of database: 10,329,639
effective search space: 7509647553
effective search space used: 7509647553
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)